Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| very-short-patch-repair endonuclease | SAMN06297358_0382 | Not Available | Positive | 453167 - 453520 | 13867.6 |
| hypothetical protein | SAMN06297358_0383 | Not Available | Positive | 453917 - 454465 | 20739.6 |
| hypothetical protein | SAMN06297358_0384 | Not Available | Positive | 454741 - 455730 | 35655.1 |
| hypothetical protein | SAMN06297358_0385 | Not Available | Negative | 455811 - 455906 | 3527.37 |
| protein of unknown function (du1801) | SAMN06297358_0386 | Not Available | Negative | 455852 - 456241 | 14954.7 |
| protein of unknown function | SAMN06297358_0387 | Not Available | Negative | 456244 - 456816 | 22257.1 |
| iron complex outermembrane recepter protein | SAMN06297358_0388 | Not Available | Positive | 457461 - 459881 | 90269.9 |
| hypothetical protein | SAMN06297358_0389 | Not Available | Negative | 459981 - 460193 | 8202.38 |
| hypothetical protein | SAMN06297358_0390 | Not Available | Positive | 460540 - 460713 | 6823.4 |
| hypothetical protein | SAMN06297358_0391 | Not Available | Positive | 460713 - 461177 | 17524.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

