Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN06297358_3956 | Not Available | Positive | 4584750 - 4585529 | 28698.1 |
| disulphide bond corrector protein dsbc | SAMN06297358_3957 | Not Available | Positive | 4585574 - 4586023 | 16874.7 |
| disulphide bond corrector protein dsbc | SAMN06297358_3958 | Not Available | Positive | 4586087 - 4586527 | 16570.8 |
| thiol:disulfide interchange protein dsbd | SAMN06297358_3959 | Not Available | Positive | 4586606 - 4588297 | 61301.9 |
| 6-phosphofructokinase | SAMN06297358_3960 | Not Available | Positive | 4588298 - 4589281 | 34796.9 |
| magnesium chelatase family protein | SAMN06297358_3961 | Not Available | Positive | 4589374 - 4590912 | 56269.1 |
| putative endonuclease | SAMN06297358_3962 | Not Available | Positive | 4591081 - 4591380 | 11927.5 |
| hypothetical protein | SAMN06297358_3963 | Not Available | Negative | 4591548 - 4591775 | 9028.69 |
| hypothetical protein | SAMN06297358_3964 | Not Available | Negative | 4591779 - 4592054 | 10655.7 |
| helicase conserved c-terminal domain-containing protein | SAMN06297358_3965 | Not Available | Negative | 4592184 - 4595153 | 114796.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

