Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage repressor protein c, contains cro/c1-type hth and peptisase s24 domains | SAMN06297358_3945 | Not Available | Negative | 4562097 - 4562768 | 25370.5 |
| hypothetical protein | SAMN06297358_3946 | Not Available | Positive | 4562860 - 4563078 | 8287.49 |
| hypothetical protein | SAMN06297358_3947 | Not Available | Positive | 4563174 - 4563359 | 6917.49 |
| hypothetical protein | SAMN06297358_3948 | Not Available | Positive | 4565053 - 4571196 | 210193.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_3949 | Not Available | Positive | 4571896 - 4578009 | 210063.0 |
| hypothetical protein | SAMN06297358_3950 | Not Available | Positive | 4578578 - 4580068 | 55868.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN06297358_3952 | Not Available | Negative | 4580225 - 4581301 | 39578.7 |
| l-lactate dehydrogenase complex protein lldg | SAMN06297358_3953 | Not Available | Negative | 4581381 - 4582025 | 24547.5 |
| cell division protease ftsh | SAMN06297358_3954 | Not Available | Negative | 4582224 - 4584308 | 76559.9 |
| ribosome-associated protein | SAMN06297358_3955 | Not Available | Negative | 4584329 - 4584703 | 14142.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

