Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3935 | Not Available | Positive | 4549444 - 4550634 | 46430.1 |
| moxr-like atpase | SAMN06297358_3936 | Not Available | Positive | 4550757 - 4551734 | 36130.0 |
| very-short-patch-repair endonuclease | SAMN06297358_3937 | Not Available | Positive | 4552019 - 4552420 | 15962.0 |
| uncharacterized conserved protein, duf58 family, contains vwf domain | SAMN06297358_3938 | Not Available | Positive | 4552661 - 4554007 | 52086.4 |
| transcription-repair coupling factor | SAMN06297358_3939 | Not Available | Negative | 4554121 - 4557537 | 130176.0 |
| protein of unknown function | SAMN06297358_3940 | Not Available | Positive | 4557701 - 4558009 | 11848.6 |
| tm2 domain-containing protein | SAMN06297358_3941 | Not Available | Positive | 4558012 - 4558371 | 13517.9 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN06297358_3942 | Not Available | Positive | 4559245 - 4560342 | 40581.6 |
| hypothetical protein | SAMN06297358_3943 | Not Available | Positive | 4560342 - 4561085 | 28467.1 |
| hypothetical protein | SAMN06297358_3944 | Not Available | Negative | 4561015 - 4561564 | 20142.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

