Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3925 | Not Available | Positive | 4538624 - 4539388 | 27718.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_3926 | Not Available | Positive | 4539452 - 4540873 | 49924.2 |
| hypothetical protein | SAMN06297358_3927 | Not Available | Positive | 4541414 - 4541602 | 7196.93 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_3928 | Not Available | Positive | 4541619 - 4543040 | 50352.9 |
| hypothetical protein | SAMN06297358_3929 | Not Available | Positive | 4544042 - 4544761 | 25009.9 |
| c1q domain-containing protein | SAMN06297358_3930 | Not Available | Positive | 4544993 - 4545727 | 25810.8 |
| uncharacterized membrane protein yckc, rdd family | SAMN06297358_3931 | Not Available | Negative | 4545785 - 4546525 | 27583.8 |
| uncharacterized membrane protein spoiim, required for sporulation | SAMN06297358_3932 | Not Available | Positive | 4546713 - 4547666 | 36276.6 |
| hypothetical protein | SAMN06297358_3933 | Not Available | Positive | 4547791 - 4548678 | 33201.4 |
| protein of unknown function | SAMN06297358_3934 | Not Available | Positive | 4548680 - 4549447 | 29923.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

