Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmotically inducible protein osmc | SAMN06297358_3904 | Not Available | Negative | 4519572 - 4519988 | 14942.6 |
| ketosteroid isomerase-related protein | SAMN06297358_3905 | Not Available | Positive | 4520167 - 4520643 | 18322.6 |
| atp-dependent clp protease adaptor protein clps | SAMN06297358_3906 | Not Available | Negative | 4520630 - 4520911 | 10912.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN06297358_3908 | Not Available | Positive | 4521363 - 4522409 | 38283.6 |
| smr domain-containing protein | SAMN06297358_3909 | Not Available | Positive | 4522515 - 4523459 | 35382.1 |
| hypothetical protein | SAMN06297358_3910 | Not Available | Positive | 4523615 - 4524574 | 35057.5 |
| methyltransferase, fkbm family | SAMN06297358_3911 | Not Available | Negative | 4524598 - 4525368 | 29071.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06297358_3912 | Not Available | Negative | 4525371 - 4526246 | 31168.6 |
| enoyl-coa hydratase/carnithine racemase | SAMN06297358_3913 | Not Available | Negative | 4526343 - 4527107 | 28177.0 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN06297358_3914 | Not Available | Negative | 4527231 - 4529978 | 100603.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

