Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane transport energization protein tonb | SAMN06297358_3884 | Not Available | Negative | 4494764 - 4496779 | 75405.4 |
| predicted transcriptional regulator | SAMN06297358_3885 | Not Available | Negative | 4496776 - 4497153 | 14635.8 |
| metallo-beta-lactamase family protein | SAMN06297358_3886 | Not Available | Positive | 4497390 - 4498799 | 51545.7 |
| peptidase family m28 | SAMN06297358_3887 | Not Available | Negative | 4498947 - 4500527 | 58030.2 |
| peptidase family m28 | SAMN06297358_3888 | Not Available | Positive | 4500628 - 4501986 | 51006.6 |
| hypothetical protein | SAMN06297358_3889 | Not Available | Negative | 4502047 - 4502832 | 29861.7 |
| abc-2 type transport system atp-binding protein | SAMN06297358_3890 | Not Available | Negative | 4502913 - 4503821 | 32564.9 |
| hypothetical protein | SAMN06297358_3891 | Not Available | Negative | 4503824 - 4503991 | 6044.57 |
| histidine kinase | SAMN06297358_3892 | Not Available | Positive | 4504246 - 4505280 | 39771.7 |
| two component transcriptional regulator, lyttr family | SAMN06297358_3893 | Not Available | Positive | 4505277 - 4506017 | 28071.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

