Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase/lipase superfamily enzyme | SAMN06297358_3874 | Not Available | Negative | 4482324 - 4483028 | 27348.3 |
| enterochelin esterase | SAMN06297358_3875 | Not Available | Positive | 4483261 - 4483989 | 27560.7 |
| anti-sigma-k factor rska | SAMN06297358_3876 | Not Available | Negative | 4483992 - 4484807 | 29922.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_3877 | Not Available | Negative | 4484811 - 4485362 | 21473.5 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN06297358_3878 | Not Available | Positive | 4485682 - 4486254 | 20044.5 |
| cubico group peptidase, beta-lactamase class c family | SAMN06297358_3879 | Not Available | Negative | 4486544 - 4488928 | 88730.8 |
| catechol 2,3-dioxygenase | SAMN06297358_3880 | Not Available | Positive | 4489164 - 4489613 | 17259.7 |
| lipid a ethanolaminephosphotransferase | SAMN06297358_3881 | Not Available | Negative | 4489647 - 4491173 | 57889.6 |
| membrane-associated phospholipid phosphatase | SAMN06297358_3882 | Not Available | Negative | 4491112 - 4492059 | 35560.5 |
| gtp-binding protein | SAMN06297358_3883 | Not Available | Positive | 4492431 - 4494233 | 67120.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

