Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (du1801) | SAMN06297358_0371 | Not Available | Negative | 444104 - 444532 | 15919.3 |
| hypothetical protein | SAMN06297358_0372 | Not Available | Negative | 444999 - 445292 | 11346.8 |
| acetyltransferase (gnat) family protein | SAMN06297358_0373 | Not Available | Negative | 445304 - 445744 | 17128.5 |
| hypothetical protein | SAMN06297358_0374 | Not Available | Negative | 445751 - 445948 | 7441.58 |
| ph domain-containing protein | SAMN06297358_0375 | Not Available | Negative | 445952 - 446437 | 17929.0 |
| putative acetyltransferase | SAMN06297358_0376 | Not Available | Negative | 446503 - 446946 | 17248.9 |
| hypothetical protein | SAMN06297358_0377 | Not Available | Negative | 447019 - 447483 | 17071.0 |
| hypothetical protein | SAMN06297358_0379 | Not Available | Negative | 447746 - 448483 | 28497.2 |
| hypothetical protein | SAMN06297358_0380 | Not Available | Negative | 448646 - 449479 | 31878.7 |
| valyl-trna synthetase | SAMN06297358_0381 | Not Available | Positive | 449981 - 452641 | 102103.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

