Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit i | SAMN06297358_3844 | Not Available | Positive | 4451335 - 4451835 | 19018.2 |
| nadh dehydrogenase subunit j | SAMN06297358_3845 | Not Available | Positive | 4451947 - 4452453 | 18455.6 |
| nadh dehydrogenase subunit k | SAMN06297358_3846 | Not Available | Positive | 4452446 - 4452775 | 12195.4 |
| nadh dehydrogenase subunit l | SAMN06297358_3847 | Not Available | Positive | 4452791 - 4454692 | 69114.9 |
| nadh dehydrogenase subunit m | SAMN06297358_3848 | Not Available | Positive | 4454713 - 4456179 | 53765.4 |
| nadh dehydrogenase subunit n | SAMN06297358_3849 | Not Available | Positive | 4456182 - 4457555 | 50083.1 |
| hypothetical protein | SAMN06297358_3850 | Not Available | Positive | 4457689 - 4458840 | 44352.9 |
| membrane-associated protein | SAMN06297358_3851 | Not Available | Positive | 4458920 - 4459579 | 25110.2 |
| inorganic pyrophosphatase | SAMN06297358_3852 | Not Available | Positive | 4459588 - 4460130 | 20487.6 |
| hemolysin, contains cbs domains | SAMN06297358_3853 | Not Available | Positive | 4460137 - 4461552 | 52248.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

