Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter substrate-binding protein, phot family | SAMN06297358_3834 | Not Available | Positive | 4441761 - 4442672 | 33924.0 |
| tfp pilus assembly protein pilf | SAMN06297358_3835 | Not Available | Positive | 4442763 - 4444463 | 62675.7 |
| nadh dehydrogenase subunit a | SAMN06297358_3836 | Not Available | Positive | 4444547 - 4444918 | 14108.7 |
| nadh-quinone oxidoreductase subunit b | SAMN06297358_3837 | Not Available | Positive | 4445042 - 4445584 | 19721.9 |
| nadh dehydrogenase subunit c | SAMN06297358_3838 | Not Available | Positive | 4445584 - 4446084 | 19260.1 |
| nadh dehydrogenase subunit d | SAMN06297358_3839 | Not Available | Positive | 4446087 - 4447301 | 46197.2 |
| nadh dehydrogenase subunit e | SAMN06297358_3840 | Not Available | Positive | 4447294 - 4447806 | 19235.3 |
| nadh dehydrogenase subunit f | SAMN06297358_3841 | Not Available | Positive | 4447806 - 4449173 | 49503.4 |
| nadh dehydrogenase subunit g | SAMN06297358_3842 | Not Available | Positive | 4449285 - 4450295 | 38048.6 |
| nadh dehydrogenase subunit h | SAMN06297358_3843 | Not Available | Positive | 4450295 - 4451329 | 38516.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

