Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_3814 | Not Available | Positive | 4418512 - 4421301 | 100765.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_3815 | Not Available | Positive | 4421343 - 4425071 | 134440.0 |
| pectate lyase | SAMN06297358_3816 | Not Available | Positive | 4425073 - 4426560 | 53880.6 |
| arac-type dna-binding protein | SAMN06297358_3817 | Not Available | Negative | 4426791 - 4427582 | 30868.3 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN06297358_3818 | Not Available | Negative | 4427582 - 4428709 | 42758.4 |
| hypothetical protein | SAMN06297358_3819 | Not Available | Negative | 4428843 - 4429256 | 16184.4 |
| predicted dehydrogenase | SAMN06297358_3820 | Not Available | Positive | 4429384 - 4430730 | 50073.6 |
| transcriptional regulator, laci family | SAMN06297358_3821 | Not Available | Negative | 4430781 - 4431797 | 38087.8 |
| hypothetical protein | SAMN06297358_3822 | Not Available | Negative | 4431893 - 4432240 | 13253.6 |
| superoxide dismutase, cu-zn family | SAMN06297358_3823 | Not Available | Positive | 4432422 - 4432949 | 18770.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

