Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine aminotransferase | SAMN06297358_3784 | Not Available | Negative | 4377778 - 4378908 | 41205.4 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN06297358_3785 | Not Available | Negative | 4379002 - 4379979 | 35784.8 |
| acetyltransferase (gnat) family protein | SAMN06297358_3786 | Not Available | Negative | 4380047 - 4380508 | 17656.2 |
| argininosuccinate synthase | SAMN06297358_3787 | Not Available | Negative | 4380598 - 4381788 | 43706.1 |
| hypothetical protein | SAMN06297358_3788 | Not Available | Negative | 4381952 - 4382650 | 26484.3 |
| hypothetical protein | SAMN06297358_3789 | Not Available | Negative | 4383075 - 4383986 | 34843.6 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN06297358_3790 | Not Available | Positive | 4384139 - 4385695 | 59517.5 |
| zinc protease | SAMN06297358_3791 | Not Available | Negative | 4385846 - 4388707 | 104851.0 |
| predicted acyltransferase | SAMN06297358_3792 | Not Available | Negative | 4388900 - 4390048 | 43202.5 |
| glucosamine-6-phosphate deaminase | SAMN06297358_3793 | Not Available | Negative | 4390259 - 4392178 | 72506.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

