Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized iron-regulated membrane protein | SAMN06297358_3773 | Not Available | Negative | 4365374 - 4366534 | 44427.4 |
| iron complex outermembrane recepter protein | SAMN06297358_3774 | Not Available | Negative | 4366589 - 4369042 | 90246.2 |
| glycine/d-amino acid oxidase | SAMN06297358_3775 | Not Available | Positive | 4369183 - 4370385 | 45020.3 |
| protein of unknown function | SAMN06297358_3776 | Not Available | Negative | 4370386 - 4371090 | 24815.9 |
| argininosuccinate lyase | SAMN06297358_3777 | Not Available | Negative | 4371245 - 4372576 | 49983.4 |
| acetylornithine deacetylase | SAMN06297358_3778 | Not Available | Negative | 4372741 - 4373805 | 38976.5 |
| four helix bundle protein | SAMN06297358_3779 | Not Available | Negative | 4373825 - 4374193 | 14041.8 |
| pyrroline-5-carboxylate reductase | SAMN06297358_3780 | Not Available | Negative | 4374229 - 4375035 | 28315.5 |
| n-acetylglutamate kinase | SAMN06297358_3781 | Not Available | Negative | 4375477 - 4376265 | 27854.6 |
| n-succinyl-l-ornithine transcarbamylase | SAMN06297358_3783 | Not Available | Negative | 4376650 - 4377636 | 36590.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

