Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muramoyltetrapeptide carboxypeptidase | SAMN06297358_3763 | Not Available | Negative | 4354065 - 4354964 | 33345.9 |
| methionyl-trna synthetase | SAMN06297358_3764 | Not Available | Positive | 4355004 - 4357112 | 79409.2 |
| miniconductance mechanosensitive channel | SAMN06297358_3765 | Not Available | Positive | 4357364 - 4358647 | 48535.0 |
| Trna-arg | Not Available | Not Available | Positive | 4358991 - 4359062 | Not Available |
| hypothetical protein | SAMN06297358_3767 | Not Available | Positive | 4359172 - 4359297 | 4615.52 |
| acyltransferase family protein | SAMN06297358_3768 | Not Available | Negative | 4359331 - 4360359 | 40374.8 |
| ipt/tig domain-containing protein | SAMN06297358_3769 | Not Available | Negative | 4360624 - 4362282 | 58428.2 |
| hypothetical protein | SAMN06297358_3770 | Not Available | Negative | 4362292 - 4363059 | 28506.3 |
| peptidase family m28 | SAMN06297358_3771 | Not Available | Negative | 4363128 - 4364330 | 44526.9 |
| hypothetical protein | SAMN06297358_3772 | Not Available | Negative | 4364353 - 4365276 | 36185.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

