Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN06297358_0361 | Not Available | Positive | 424924 - 426267 | 50362.1 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN06297358_0362 | Not Available | Positive | 426414 - 427577 | 44291.6 |
| pkd repeat-containing protein | SAMN06297358_0363 | Not Available | Positive | 427640 - 435922 | 294539.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN06297358_0364 | Not Available | Positive | 435923 - 436957 | 37941.9 |
| hypothetical protein | SAMN06297358_0365 | Not Available | Negative | 436954 - 437052 | 3588.53 |
| multiple antibiotic resistance protein | SAMN06297358_0366 | Not Available | Negative | 437096 - 437671 | 20876.6 |
| atp-binding cassette protein, chvd family | SAMN06297358_0367 | Not Available | Negative | 437899 - 439551 | 61518.0 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN06297358_0368 | Not Available | Negative | 440120 - 441595 | 55518.1 |
| iron complex outermembrane recepter protein | SAMN06297358_0369 | Not Available | Positive | 441790 - 443646 | 69542.9 |
| lactoylglutathione lyase | SAMN06297358_0370 | Not Available | Negative | 443718 - 444095 | 14089.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

