Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd and ragb outer membrane lipoprotein | SAMN06297358_3753 | Not Available | Positive | 4334796 - 4336469 | 61477.7 |
| hypothetical protein | SAMN06297358_3754 | Not Available | Positive | 4336482 - 4337366 | 31698.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_3755 | Not Available | Positive | 4337789 - 4340731 | 107331.0 |
| starch-binding associating with outer membrane | SAMN06297358_3756 | Not Available | Positive | 4340744 - 4342270 | 55635.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_3757 | Not Available | Positive | 4342603 - 4345764 | 112727.0 |
| susd family protein | SAMN06297358_3758 | Not Available | Positive | 4345819 - 4347273 | 52117.9 |
| hypothetical protein | SAMN06297358_3759 | Not Available | Negative | 4347643 - 4348308 | 25174.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_3760 | Not Available | Positive | 4348900 - 4352040 | 113793.0 |
| susd family protein | SAMN06297358_3761 | Not Available | Positive | 4352051 - 4353550 | 56369.0 |
| putative oxidoreductase | SAMN06297358_3762 | Not Available | Negative | 4353650 - 4354057 | 14426.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

