Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elaa protein | SAMN06297358_3743 | Not Available | Positive | 4318925 - 4319380 | 17412.9 |
| aspartyl-trna synthetase | SAMN06297358_3744 | Not Available | Negative | 4319807 - 4321558 | 66089.1 |
| dna polymerase-3 subunit delta' | SAMN06297358_3745 | Not Available | Positive | 4321932 - 4323077 | 43255.1 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN06297358_3746 | Not Available | Positive | 4323079 - 4324611 | 58077.6 |
| gliding motility-associated lipoprotein gldh | SAMN06297358_3747 | Not Available | Positive | 4324604 - 4325173 | 21733.1 |
| thioredoxin-like | SAMN06297358_3748 | Not Available | Positive | 4325321 - 4326511 | 44873.8 |
| hypothetical protein | SAMN06297358_3749 | Not Available | Positive | 4327059 - 4327232 | 6400.97 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN06297358_3750 | Not Available | Negative | 4327148 - 4328449 | 47534.7 |
| zinc carboxypeptidase | SAMN06297358_3751 | Not Available | Positive | 4328606 - 4331089 | 93254.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_3752 | Not Available | Positive | 4331661 - 4334786 | 111736.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

