Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase-1 | SAMN06297358_3733 | Not Available | Positive | 4308122 - 4309171 | 39652.2 |
| hypothetical protein | SAMN06297358_3734 | Not Available | Negative | 4309248 - 4309601 | 12682.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06297358_3735 | Not Available | Positive | 4309715 - 4310296 | 22465.1 |
| quaternary ammonium compound-resistance protein suge | SAMN06297358_3736 | Not Available | Positive | 4310625 - 4310951 | 11623.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_3737 | Not Available | Positive | 4311118 - 4311699 | 22275.8 |
| hypothetical protein | SAMN06297358_3738 | Not Available | Positive | 4311696 - 4312199 | 18824.9 |
| protein of unknown function | SAMN06297358_3739 | Not Available | Negative | 4312227 - 4312796 | 21299.0 |
| hypothetical protein | SAMN06297358_3740 | Not Available | Negative | 4312860 - 4313042 | 6781.43 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN06297358_3741 | Not Available | Negative | 4313252 - 4315756 | 94672.5 |
| phosphoenolpyruvate carboxylase, type 1 | SAMN06297358_3742 | Not Available | Positive | 4316130 - 4318712 | 98594.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

