Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3672 | Not Available | Negative | 4244219 - 4244371 | 5854.2 |
| putative auto-transporter adhesin, head gin domain | SAMN06297358_3673 | Not Available | Negative | 4244423 - 4245055 | 22519.7 |
| thiamine biosynthesis lipoprotein apbe | SAMN06297358_3674 | Not Available | Positive | 4245463 - 4246980 | 56208.0 |
| hypothetical protein | SAMN06297358_3675 | Not Available | Positive | 4246987 - 4247607 | 23378.9 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN06297358_3676 | Not Available | Negative | 4247671 - 4248129 | 17905.2 |
| rrna maturation rnase ybey | SAMN06297358_3677 | Not Available | Negative | 4248224 - 4248646 | 16331.4 |
| hypothetical protein | SAMN06297358_3678 | Not Available | Negative | 4248793 - 4252107 | 127166.0 |
| hypothetical protein | SAMN06297358_3679 | Not Available | Positive | 4252268 - 4252357 | 3397.33 |
| glycerophosphoryl diester phosphodiesterase | SAMN06297358_3680 | Not Available | Positive | 4252379 - 4253209 | 31340.0 |
| cold-shock dna-binding protein family | SAMN06297358_3681 | Not Available | Negative | 4253283 - 4253474 | 6984.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

