Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | SAMN06297358_3662 | Not Available | Negative | 4231192 - 4232232 | 38206.6 |
| peptidase family s41 | SAMN06297358_3663 | Not Available | Negative | 4232232 - 4233785 | 59002.8 |
| quinolinate synthetase | SAMN06297358_3664 | Not Available | Negative | 4233787 - 4234779 | 36822.8 |
| l-aspartate oxidase | SAMN06297358_3665 | Not Available | Positive | 4235261 - 4236847 | 59428.1 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN06297358_3666 | Not Available | Positive | 4236898 - 4237407 | 18137.1 |
| ig-like domain-containing protein | SAMN06297358_3667 | Not Available | Negative | 4237408 - 4239147 | 65794.0 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN06297358_3668 | Not Available | Negative | 4239269 - 4241131 | 69529.5 |
| atp-binding cassette, subfamily f, uup | SAMN06297358_3669 | Not Available | Negative | 4241215 - 4243077 | 71018.5 |
| four helix bundle sensory module for signal transduction | SAMN06297358_3670 | Not Available | Negative | 4243281 - 4243967 | 26216.2 |
| hypothetical protein | SAMN06297358_3671 | Not Available | Negative | 4243945 - 4244085 | 5267.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

