Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat | SAMN06297358_0351 | Not Available | Positive | 412900 - 414408 | 54156.4 |
| predicted protein | SAMN06297358_0352 | Not Available | Positive | 414413 - 414895 | 17943.7 |
| sulfite reductase (nadph) flavoprotein alpha-component | SAMN06297358_0353 | Not Available | Positive | 414905 - 417100 | 82796.7 |
| thiamine biosynthesis lipoprotein | SAMN06297358_0354 | Not Available | Positive | 417285 - 418358 | 39549.1 |
| hypothetical protein | SAMN06297358_0355 | Not Available | Negative | 418637 - 418843 | 7600.81 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN06297358_0356 | Not Available | Negative | 418892 - 419515 | 23019.2 |
| mfs transporter, fhs family, l-fucose permease | SAMN06297358_0357 | Not Available | Positive | 419725 - 421155 | 51060.4 |
| glucose/galactose transporter | SAMN06297358_0358 | Not Available | Positive | 421314 - 422603 | 46166.7 |
| dcmp deaminase | SAMN06297358_0359 | Not Available | Positive | 422693 - 423151 | 16488.5 |
| gmp synthase (glutamine-hydrolysing) | SAMN06297358_0360 | Not Available | Positive | 423441 - 424967 | 56044.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

