Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3651 | Not Available | Positive | 4221833 - 4222423 | 23361.1 |
| ankyrin repeat-containing protein | SAMN06297358_3652 | Not Available | Positive | 4222521 - 4223315 | 29727.6 |
| hypothetical protein | SAMN06297358_3653 | Not Available | Positive | 4223326 - 4223742 | 15777.2 |
| arac-type dna-binding protein | SAMN06297358_3654 | Not Available | Positive | 4223758 - 4224564 | 31393.7 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN06297358_3655 | Not Available | Positive | 4224739 - 4225161 | 15997.2 |
| hypothetical protein | SAMN06297358_3657 | Not Available | Negative | 4225649 - 4226344 | 25568.2 |
| glycine/d-amino acid oxidase | SAMN06297358_3658 | Not Available | Positive | 4226352 - 4227566 | 44955.5 |
| formyltetrahydrofolate deformylase | SAMN06297358_3659 | Not Available | Negative | 4227600 - 4228439 | 31859.8 |
| dna recombination protein rmuc | SAMN06297358_3660 | Not Available | Positive | 4228573 - 4229856 | 48742.4 |
| hypothetical protein | SAMN06297358_3661 | Not Available | Negative | 4229851 - 4231098 | 48765.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

