Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellum-specific peptidoglycan hydrolase flgj | SAMN06297358_3631 | Not Available | Positive | 4201742 - 4202410 | 25405.4 |
| flagellum-specific peptidoglycan hydrolase flgj | SAMN06297358_3632 | Not Available | Positive | 4202418 - 4203263 | 32338.5 |
| hypothetical protein | SAMN06297358_3633 | Not Available | Positive | 4203313 - 4204062 | 28548.5 |
| hypothetical protein | SAMN06297358_3634 | Not Available | Positive | 4204062 - 4204379 | 12467.5 |
| protein of unknown function | SAMN06297358_3635 | Not Available | Positive | 4204461 - 4205453 | 37423.0 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN06297358_3636 | Not Available | Positive | 4205921 - 4207255 | 48908.7 |
| hypothetical protein | SAMN06297358_3637 | Not Available | Positive | 4207419 - 4208783 | 53087.6 |
| uncharacterized conserved protein ybjq, upf0145 family | SAMN06297358_3638 | Not Available | Negative | 4208846 - 4209169 | 11165.5 |
| hypothetical protein | SAMN06297358_3639 | Not Available | Positive | 4209402 - 4210091 | 25369.7 |
| carboxyl-terminal processing protease | SAMN06297358_3640 | Not Available | Positive | 4210272 - 4212554 | 85013.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

