Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexosaminidase | SAMN06297358_3611 | Not Available | Positive | 4178140 - 4179993 | 69401.6 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN06297358_3612 | Not Available | Negative | 4179990 - 4181204 | 44229.7 |
| predicted protein | SAMN06297358_3613 | Not Available | Positive | 4181380 - 4182390 | 35683.7 |
| fad dependent oxidoreductase | SAMN06297358_3614 | Not Available | Positive | 4182397 - 4184250 | 67709.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_3615 | Not Available | Positive | 4184282 - 4187461 | 116057.0 |
| starch-binding associating with outer membrane | SAMN06297358_3616 | Not Available | Positive | 4187483 - 4189303 | 66452.1 |
| protein of unknown function | SAMN06297358_3617 | Not Available | Positive | 4189303 - 4190238 | 34448.7 |
| protein of unknown function | SAMN06297358_3618 | Not Available | Positive | 4190255 - 4191640 | 51739.8 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN06297358_3619 | Not Available | Positive | 4191722 - 4192960 | 45600.4 |
| lysophospholipase l1 | SAMN06297358_3620 | Not Available | Positive | 4192962 - 4193639 | 25569.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

