Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | SAMN06297358_3601 | Not Available | Positive | 4166987 - 4168825 | 67794.8 |
| single-strand binding protein | SAMN06297358_3602 | Not Available | Negative | 4169127 - 4169558 | 16079.1 |
| a/g-specific dna-adenine glycosylase | SAMN06297358_3603 | Not Available | Negative | 4169571 - 4170617 | 40335.6 |
| dna-binding protein hu-beta | SAMN06297358_3604 | Not Available | Positive | 4170790 - 4171092 | 11113.6 |
| tetratricopeptide repeat-containing protein | SAMN06297358_3605 | Not Available | Positive | 4171104 - 4171952 | 30541.8 |
| ribonuclease g | SAMN06297358_3606 | Not Available | Positive | 4172191 - 4173738 | 58576.3 |
| dna repair protein rada/sms | SAMN06297358_3607 | Not Available | Positive | 4173876 - 4175255 | 50313.8 |
| protein of unknown function | SAMN06297358_3608 | Not Available | Positive | 4175496 - 4175960 | 16918.7 |
| hypothetical protein | SAMN06297358_3609 | Not Available | Positive | 4176142 - 4177332 | 43291.6 |
| s-formylglutathione hydrolase frmb | SAMN06297358_3610 | Not Available | Positive | 4177335 - 4178135 | 30512.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

