Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3591 | Not Available | Negative | 4158502 - 4158648 | 5039.19 |
| helix-turn-helix | SAMN06297358_3592 | Not Available | Positive | 4158797 - 4159108 | 11873.5 |
| predicted arabinose efflux permease, mfs family | SAMN06297358_3593 | Not Available | Negative | 4159192 - 4160454 | 45547.4 |
| hypothetical protein | SAMN06297358_3594 | Not Available | Negative | 4160483 - 4160890 | 15300.4 |
| putative membrane protein | SAMN06297358_3595 | Not Available | Positive | 4160905 - 4161255 | 12159.8 |
| acyl-coa dehydrogenase | SAMN06297358_3596 | Not Available | Negative | 4161462 - 4162601 | 41430.7 |
| l-aspartate 1-decarboxylase | SAMN06297358_3597 | Not Available | Negative | 4163076 - 4163426 | 12940.7 |
| pantoate--beta-alanine ligase | SAMN06297358_3598 | Not Available | Negative | 4163619 - 4164503 | 32568.7 |
| starch synthase | SAMN06297358_3599 | Not Available | Positive | 4164609 - 4165439 | 31839.1 |
| protein of unknown function | SAMN06297358_3600 | Not Available | Positive | 4165463 - 4166905 | 52096.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

