Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3581 | Not Available | Negative | 4150078 - 4150665 | 22076.9 |
| hypothetical protein | SAMN06297358_3582 | Not Available | Negative | 4151008 - 4151250 | 9094.34 |
| caax protease self-immunity | SAMN06297358_3583 | Not Available | Negative | 4151597 - 4152091 | 19433.4 |
| hypothetical protein | SAMN06297358_3584 | Not Available | Negative | 4152148 - 4152348 | 7433.99 |
| hypothetical protein | SAMN06297358_3585 | Not Available | Negative | 4152450 - 4152764 | 12478.4 |
| atp-binding cassette, subfamily b | SAMN06297358_3586 | Not Available | Negative | 4152855 - 4155002 | 79982.1 |
| hlyd family secretion protein | SAMN06297358_3587 | Not Available | Negative | 4155011 - 4156219 | 45949.1 |
| hypothetical protein | SAMN06297358_3588 | Not Available | Negative | 4156329 - 4157417 | 42154.9 |
| hypothetical protein | SAMN06297358_3589 | Not Available | Negative | 4157471 - 4157689 | 8204.13 |
| membrane associated serine protease, rhomboid family | SAMN06297358_3590 | Not Available | Positive | 4157853 - 4158509 | 25739.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

