Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0341 | Not Available | Positive | 393318 - 396152 | 104099.0 |
| starch-binding associating with outer membrane | SAMN06297358_0342 | Not Available | Positive | 396163 - 397842 | 62526.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0343 | Not Available | Positive | 397917 - 401051 | 115181.0 |
| starch-binding associating with outer membrane | SAMN06297358_0344 | Not Available | Positive | 401075 - 402805 | 64152.0 |
| transcriptional regulator, laci family | SAMN06297358_0345 | Not Available | Positive | 402945 - 403976 | 38472.9 |
| fad dependent oxidoreductase | SAMN06297358_0346 | Not Available | Positive | 404124 - 406412 | 84903.3 |
| transporter, sss family | SAMN06297358_0347 | Not Available | Positive | 406415 - 408097 | 60751.0 |
| sialate o-acetylesterase | SAMN06297358_0348 | Not Available | Positive | 408094 - 409509 | 52345.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0349 | Not Available | Positive | 410042 - 412189 | 75416.8 |
| Trna-his | Not Available | Not Available | Positive | 412500 - 412576 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

