Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3530 | Not Available | Positive | 4099073 - 4099375 | 10707.0 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN06297358_3531 | Not Available | Negative | 4099443 - 4100120 | 24674.6 |
| hypothetical protein | SAMN06297358_3532 | Not Available | Negative | 4100132 - 4100437 | 10708.8 |
| ompa family protein | SAMN06297358_3533 | Not Available | Negative | 4100526 - 4101353 | 31035.9 |
| 2,4-dienoyl-coa reductase | SAMN06297358_3534 | Not Available | Negative | 4101433 - 4102494 | 38872.5 |
| protein of unknown function | SAMN06297358_3535 | Not Available | Negative | 4102711 - 4103256 | 20835.2 |
| hemolysin iii | SAMN06297358_3536 | Not Available | Positive | 4103418 - 4104101 | 26103.5 |
| d-lactate dehydrogenase | SAMN06297358_3537 | Not Available | Positive | 4104128 - 4105132 | 36959.8 |
| protein-tyrosine phosphatase | SAMN06297358_3538 | Not Available | Negative | 4105467 - 4105895 | 16110.0 |
| hypothetical protein | SAMN06297358_3539 | Not Available | Positive | 4106017 - 4107243 | 44815.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

