Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06297358_3520 | Not Available | Negative | 4088428 - 4089234 | 29757.2 |
| tonb-dependent receptor plug domain | SAMN06297358_3521 | Not Available | Negative | 4089244 - 4091586 | 87738.4 |
| trna (guanine-n7-)-methyltransferase | SAMN06297358_3522 | Not Available | Positive | 4091820 - 4092470 | 25005.8 |
| methylated-dna-protein-cysteine methyltransferase related protein | SAMN06297358_3523 | Not Available | Positive | 4092534 - 4092878 | 12624.3 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN06297358_3524 | Not Available | Positive | 4092963 - 4093304 | 13036.7 |
| selenoprotein w-related protein | SAMN06297358_3525 | Not Available | Positive | 4093369 - 4093647 | 10483.6 |
| hypothetical protein | SAMN06297358_3526 | Not Available | Negative | 4093795 - 4094478 | 24137.3 |
| caax protease self-immunity | SAMN06297358_3527 | Not Available | Positive | 4094544 - 4095236 | 26460.2 |
| dna polymerase i | SAMN06297358_3528 | Not Available | Positive | 4095297 - 4098095 | 104703.0 |
| tonb family c-terminal domain-containing protein | SAMN06297358_3529 | Not Available | Positive | 4098148 - 4099023 | 33740.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

