Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas/pac sensor hybrid histidine kinase | SAMN06297358_3500 | Not Available | Positive | 4072612 - 4074057 | 54700.4 |
| gas vesicle protein | SAMN06297358_3501 | Not Available | Positive | 4074264 - 4074530 | 9459.13 |
| putative holin-x, holin superfamily iii | SAMN06297358_3502 | Not Available | Positive | 4074553 - 4074924 | 13864.1 |
| hypothetical protein | SAMN06297358_3503 | Not Available | Positive | 4074914 - 4075357 | 16517.1 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN06297358_3504 | Not Available | Negative | 4075437 - 4076150 | 26725.6 |
| hypothetical protein | SAMN06297358_3505 | Not Available | Positive | 4076454 - 4077770 | 50360.4 |
| hypothetical protein | SAMN06297358_3506 | Not Available | Positive | 4077938 - 4078993 | 41260.1 |
| arac-type dna-binding protein | SAMN06297358_3507 | Not Available | Positive | 4079029 - 4079412 | 14933.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06297358_3508 | Not Available | Positive | 4079476 - 4080240 | 26950.6 |
| putative membrane protein | SAMN06297358_3509 | Not Available | Negative | 4080514 - 4081413 | 34657.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

