Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00255 family protein | SAMN06297358_3490 | Not Available | Positive | 4062553 - 4063416 | 32656.1 |
| guanylate kinase | SAMN06297358_3491 | Not Available | Positive | 4063485 - 4064051 | 21498.5 |
| four helix bundle protein | SAMN06297358_3492 | Not Available | Positive | 4064127 - 4064495 | 14287.0 |
| nicotinate-nucleotide adenylyltransferase | SAMN06297358_3493 | Not Available | Positive | 4064500 - 4065105 | 23345.2 |
| glutaminyl-trna synthetase | SAMN06297358_3494 | Not Available | Negative | 4065184 - 4066833 | 62779.3 |
| methylmalonyl-coa mutase, c-terminal domain | SAMN06297358_3495 | Not Available | Positive | 4066954 - 4067373 | 15102.6 |
| enoyl-coa hydratase | SAMN06297358_3496 | Not Available | Positive | 4067379 - 4068161 | 27889.5 |
| two-component system, ntrc family, response regulator hydg | SAMN06297358_3497 | Not Available | Positive | 4068313 - 4069743 | 53227.9 |
| pas domain s-box-containing protein | SAMN06297358_3498 | Not Available | Positive | 4069828 - 4072191 | 89563.2 |
| response regulator receiver domain-containing protein | SAMN06297358_3499 | Not Available | Positive | 4072191 - 4072601 | 15128.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

