Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN06297358_3480 | Not Available | Negative | 4054084 - 4054347 | 9923.2 |
| site-specific recombinase xerd | SAMN06297358_3481 | Not Available | Negative | 4054511 - 4055716 | 45953.6 |
| Trna-ser | Not Available | Not Available | Positive | 4055968 - 4056054 | Not Available |
| pyruvate kinase | SAMN06297358_3483 | Not Available | Negative | 4056142 - 4057572 | 52378.3 |
| hypothetical protein | SAMN06297358_3484 | Not Available | Negative | 4057703 - 4058122 | 16407.8 |
| acyl carrier protein | SAMN06297358_3485 | Not Available | Positive | 4058276 - 4058512 | 8460.92 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN06297358_3486 | Not Available | Positive | 4058541 - 4059794 | 44462.8 |
| ribonuclease-3 | SAMN06297358_3487 | Not Available | Positive | 4059877 - 4060605 | 27680.7 |
| hypothetical protein | SAMN06297358_3488 | Not Available | Negative | 4060684 - 4061403 | 27329.7 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN06297358_3489 | Not Available | Positive | 4061474 - 4062238 | 28651.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

