Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3470 | Not Available | Negative | 4045715 - 4046278 | 21841.1 |
| predicted transcriptional regulator, contains an hth and pua-like domains | SAMN06297358_3471 | Not Available | Negative | 4046460 - 4046828 | 14189.2 |
| hypothetical protein | SAMN06297358_3472 | Not Available | Negative | 4046825 - 4048357 | 59064.1 |
| adenylate kinase | SAMN06297358_3473 | Not Available | Negative | 4048361 - 4048924 | 20974.1 |
| site-specific recombinase xerd | SAMN06297358_3474 | Not Available | Positive | 4049071 - 4050009 | 36391.0 |
| peptidase c39 family protein | SAMN06297358_3475 | Not Available | Positive | 4050012 - 4050410 | 15338.4 |
| trypsin-like peptidase domain-containing protein | SAMN06297358_3476 | Not Available | Negative | 4050403 - 4051419 | 38202.9 |
| hypothetical protein | SAMN06297358_3477 | Not Available | Negative | 4051497 - 4052057 | 21077.6 |
| hypothetical protein | SAMN06297358_3478 | Not Available | Negative | 4052064 - 4052615 | 21125.2 |
| hypothetical protein | SAMN06297358_3479 | Not Available | Negative | 4053603 - 4054058 | 18135.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

