Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c553 | SAMN06297358_3460 | Not Available | Positive | 4030151 - 4030555 | 14581.6 |
| hypothetical protein | SAMN06297358_3461 | Not Available | Negative | 4031241 - 4032422 | 42776.0 |
| duf218 domain-containing protein | SAMN06297358_3462 | Not Available | Negative | 4032468 - 4033724 | 48124.2 |
| starch-binding associating with outer membrane | SAMN06297358_3463 | Not Available | Negative | 4033726 - 4035108 | 51938.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_3464 | Not Available | Negative | 4035113 - 4038331 | 117540.0 |
| fecr family protein | SAMN06297358_3465 | Not Available | Negative | 4038423 - 4039460 | 39226.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_3466 | Not Available | Negative | 4039715 - 4040299 | 22410.8 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN06297358_3467 | Not Available | Negative | 4040623 - 4042932 | 87127.2 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN06297358_3468 | Not Available | Negative | 4043036 - 4043611 | 22025.5 |
| hypothetical protein | SAMN06297358_3469 | Not Available | Negative | 4043770 - 4045710 | 75676.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

