Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN06297358_0331 | Not Available | Positive | 374370 - 375137 | 29245.0 |
| beta-glucosidase | SAMN06297358_0332 | Not Available | Positive | 375143 - 377338 | 81453.6 |
| signal transduction histidine kinase | SAMN06297358_0333 | Not Available | Positive | 377615 - 381592 | 150455.0 |
| glycosyl hydrolase family 88 | SAMN06297358_0334 | Not Available | Positive | 382147 - 383337 | 45745.2 |
| glycosyl hydrolases family 28 | SAMN06297358_0335 | Not Available | Positive | 383397 - 384611 | 44247.1 |
| hypothetical protein | SAMN06297358_0336 | Not Available | Positive | 384769 - 384957 | 7247.96 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0337 | Not Available | Positive | 385168 - 388176 | 110555.0 |
| starch-binding associating with outer membrane | SAMN06297358_0338 | Not Available | Positive | 388278 - 389924 | 61452.6 |
| suse outer membrane protein | SAMN06297358_0339 | Not Available | Positive | 389993 - 391186 | 43783.8 |
| hypothetical protein | SAMN06297358_0340 | Not Available | Positive | 391281 - 392846 | 59402.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

