Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endonuclease | SAMN06297358_3450 | Not Available | Negative | 4019366 - 4019662 | 11352.8 |
| atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains) | SAMN06297358_3451 | Not Available | Negative | 4019721 - 4022975 | 122981.0 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN06297358_3452 | Not Available | Negative | 4023012 - 4023482 | 17981.6 |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN06297358_3453 | Not Available | Negative | 4023560 - 4024363 | 29316.0 |
| tatd dnase family protein | SAMN06297358_3454 | Not Available | Negative | 4024441 - 4025091 | 24599.4 |
| thioredoxin-like | SAMN06297358_3455 | Not Available | Positive | 4025207 - 4025719 | 18988.9 |
| beta-glucosidase | SAMN06297358_3456 | Not Available | Negative | 4025768 - 4027474 | 62693.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06297358_3457 | Not Available | Positive | 4027859 - 4028482 | 22762.2 |
| hypothetical protein | SAMN06297358_3458 | Not Available | Positive | 4028573 - 4028794 | 8487.98 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN06297358_3459 | Not Available | Positive | 4029025 - 4030149 | 41177.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

