Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3440 | Not Available | Positive | 4007508 - 4008791 | 48267.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3441 | Not Available | Positive | 4008979 - 4009728 | 29079.8 |
| protease i | SAMN06297358_3442 | Not Available | Positive | 4009926 - 4010486 | 20357.0 |
| hypothetical protein | SAMN06297358_3443 | Not Available | Negative | 4010554 - 4011597 | 41413.7 |
| fic family protein | SAMN06297358_3444 | Not Available | Negative | 4011606 - 4012733 | 43554.7 |
| outer membrane protein | SAMN06297358_3445 | Not Available | Negative | 4012919 - 4013554 | 22908.9 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN06297358_3446 | Not Available | Negative | 4014056 - 4015042 | 36018.6 |
| hypothetical protein | SAMN06297358_3447 | Not Available | Negative | 4015196 - 4015552 | 13455.0 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN06297358_3448 | Not Available | Negative | 4015557 - 4016108 | 21457.8 |
| pd-(d/e)xk nuclease superfamily protein | SAMN06297358_3449 | Not Available | Negative | 4016371 - 4019211 | 108353.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

