Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase d | SAMN06297358_3410 | Not Available | Negative | 3971043 - 3973133 | 76209.7 |
| lipopolysaccharide-assembly, lptc-related | SAMN06297358_3411 | Not Available | Negative | 3973272 - 3973904 | 23514.3 |
| hypothetical protein | SAMN06297358_3412 | Not Available | Negative | 3973935 - 3975263 | 48756.9 |
| type iii pantothenate kinase | SAMN06297358_3413 | Not Available | Negative | 3975244 - 3975981 | 27566.1 |
| hypothetical protein | SAMN06297358_3414 | Not Available | Negative | 3976197 - 3977174 | 37781.8 |
| conserved hypothetical protein | SAMN06297358_3415 | Not Available | Negative | 3977257 - 3978243 | 37373.9 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN06297358_3416 | Not Available | Negative | 3978360 - 3979211 | 32835.8 |
| hypothetical protein | SAMN06297358_3417 | Not Available | Negative | 3979281 - 3979373 | 3514.33 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN06297358_3418 | Not Available | Positive | 3979623 - 3980693 | 40558.1 |
| protein of unknown function | SAMN06297358_3419 | Not Available | Negative | 3980704 - 3980952 | 9468.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

