Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | SAMN06297358_3400 | Not Available | Positive | 3961596 - 3962711 | 41137.7 |
| uridylate kinase | SAMN06297358_3401 | Not Available | Positive | 3962737 - 3963444 | 25946.6 |
| ribosome recycling factor | SAMN06297358_3402 | Not Available | Positive | 3963490 - 3964053 | 20917.5 |
| atp-binding cassette, subfamily b | SAMN06297358_3403 | Not Available | Positive | 3964154 - 3965893 | 64987.6 |
| glucose-1-phosphate thymidylyltransferase | SAMN06297358_3404 | Not Available | Negative | 3965958 - 3966818 | 31350.0 |
| dtdp-4-dehydrorhamnose reductase | SAMN06297358_3405 | Not Available | Negative | 3966829 - 3967692 | 31815.0 |
| dtdp-glucose 4,6-dehydratase | SAMN06297358_3406 | Not Available | Negative | 3967693 - 3968745 | 39930.6 |
| protein of unknown function | SAMN06297358_3407 | Not Available | Negative | 3968829 - 3969395 | 21324.4 |
| protein of unknown function | SAMN06297358_3408 | Not Available | Negative | 3969532 - 3970368 | 31981.8 |
| protein of unknown function | SAMN06297358_3409 | Not Available | Negative | 3970410 - 3970925 | 19387.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

