Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN06297358_3390 | Not Available | Positive | 3953038 - 3953322 | 10607.1 |
| hypothetical protein | SAMN06297358_3391 | Not Available | Negative | 3953390 - 3953593 | 7737.0 |
| rhodanese-related sulfurtransferase | SAMN06297358_3392 | Not Available | Negative | 3953679 - 3953996 | 11897.2 |
| protein of unknown function | SAMN06297358_3393 | Not Available | Positive | 3954174 - 3955256 | 40755.2 |
| orf6n domain-containing protein | SAMN06297358_3394 | Not Available | Positive | 3955376 - 3955915 | 21087.7 |
| lsu ribosomal protein l13p | SAMN06297358_3395 | Not Available | Positive | 3956302 - 3956745 | 16407.1 |
| small subunit ribosomal protein s9 | SAMN06297358_3396 | Not Available | Positive | 3956768 - 3957154 | 14257.4 |
| ssu ribosomal protein s2p | SAMN06297358_3397 | Not Available | Positive | 3957176 - 3958000 | 30420.8 |
| translation elongation factor ts (ef-ts) | SAMN06297358_3398 | Not Available | Positive | 3958105 - 3958950 | 29804.6 |
| uncharacterized conserved protein | SAMN06297358_3399 | Not Available | Positive | 3959119 - 3961542 | 87849.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

