Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytxh-like protein | SAMN06297358_3380 | Not Available | Positive | 3943795 - 3944001 | 7166.71 |
| methyltransferase domain-containing protein | SAMN06297358_3381 | Not Available | Positive | 3944059 - 3944739 | 25968.0 |
| tripeptide aminopeptidase | SAMN06297358_3382 | Not Available | Negative | 3944836 - 3946089 | 45660.5 |
| hypothetical protein | SAMN06297358_3383 | Not Available | Positive | 3946115 - 3946861 | 27725.8 |
| zinc carboxypeptidase | SAMN06297358_3384 | Not Available | Positive | 3946944 - 3948686 | 66999.9 |
| membrane associated serine protease, rhomboid family | SAMN06297358_3385 | Not Available | Positive | 3948805 - 3949422 | 23402.0 |
| hypothetical protein | SAMN06297358_3386 | Not Available | Negative | 3949402 - 3950364 | 37056.6 |
| hypothetical protein | SAMN06297358_3387 | Not Available | Negative | 3950444 - 3951577 | 43347.7 |
| l-alanine-dl-glutamate epimerase | SAMN06297358_3388 | Not Available | Positive | 3951651 - 3952682 | 38474.7 |
| hypothetical protein | SAMN06297358_3389 | Not Available | Negative | 3952743 - 3952853 | 4001.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

