Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN06297358_3370 | Not Available | Negative | 3931825 - 3932841 | 37562.6 |
| hypothetical protein | SAMN06297358_3371 | Not Available | Positive | 3932955 - 3933299 | 13217.1 |
| outer membrane protein ompa | SAMN06297358_3372 | Not Available | Negative | 3933354 - 3934031 | 22871.3 |
| abc-2 type transport system atp-binding protein | SAMN06297358_3373 | Not Available | Negative | 3934218 - 3934913 | 26070.1 |
| hypothetical protein | SAMN06297358_3374 | Not Available | Negative | 3934918 - 3936390 | 56009.1 |
| putative atpase | SAMN06297358_3375 | Not Available | Negative | 3936392 - 3937672 | 47092.9 |
| superfamily ii dna and rna helicase | SAMN06297358_3376 | Not Available | Negative | 3937924 - 3939159 | 45755.1 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | SAMN06297358_3377 | Not Available | Positive | 3939934 - 3940602 | 25158.3 |
| succinate dehydrogenase subunit a | SAMN06297358_3378 | Not Available | Positive | 3940634 - 3942613 | 73410.9 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN06297358_3379 | Not Available | Positive | 3942704 - 3943474 | 27980.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

