Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN06297358_0321 | Not Available | Positive | 357647 - 359557 | 73984.8 |
| lysophospholipase l1 | SAMN06297358_0322 | Not Available | Positive | 359783 - 360556 | 28712.3 |
| prolyl oligopeptidase family protein | SAMN06297358_0323 | Not Available | Negative | 360575 - 361840 | 47797.1 |
| hypothetical protein | SAMN06297358_0324 | Not Available | Negative | 361851 - 361991 | 5019.2 |
| protein of unknown function | SAMN06297358_0325 | Not Available | Positive | 362186 - 363751 | 59769.6 |
| pilus formation protein n terminal region | SAMN06297358_0326 | Not Available | Positive | 363782 - 365575 | 65067.7 |
| melibiase | SAMN06297358_0327 | Not Available | Positive | 365592 - 367646 | 78505.1 |
| alpha-glucosidase | SAMN06297358_0328 | Not Available | Positive | 367658 - 369646 | 75035.1 |
| beta-glucuronidase | SAMN06297358_0329 | Not Available | Positive | 369658 - 371439 | 68929.4 |
| glycosyl hydrolases family 2 | SAMN06297358_0330 | Not Available | Positive | 371632 - 374358 | 104849.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

