Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN06297358_3329 | Not Available | Negative | 3881155 - 3882234 | 40769.7 |
| response regulator receiver domain-containing protein | SAMN06297358_3330 | Not Available | Negative | 3882239 - 3882634 | 15005.4 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN06297358_3331 | Not Available | Negative | 3882724 - 3883200 | 17967.0 |
| imidazolonepropionase | SAMN06297358_3333 | Not Available | Negative | 3884118 - 3885470 | 48589.4 |
| imidazolonepropionase | SAMN06297358_3334 | Not Available | Negative | 3885421 - 3888450 | 110129.0 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN06297358_3335 | Not Available | Negative | 3888656 - 3891862 | 117349.0 |
| hypothetical protein | SAMN06297358_3336 | Not Available | Positive | 3892242 - 3892691 | 16515.1 |
| anthranilate synthase component 1 | SAMN06297358_3337 | Not Available | Positive | 3893039 - 3894442 | 53071.4 |
| anthranilate synthase component 2 | SAMN06297358_3338 | Not Available | Positive | 3894517 - 3895119 | 22113.5 |
| indole-3-glycerol phosphate synthase | SAMN06297358_3339 | Not Available | Positive | 3895216 - 3895998 | 28943.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

