Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| teichuronic acid biosynthesis glycosyltransferase tuag | SAMN06297358_3319 | Not Available | Positive | 3862123 - 3862929 | 30998.6 |
| acyl transferase domain-containing protein | SAMN06297358_3320 | Not Available | Positive | 3863046 - 3867863 | 176799.0 |
| amino acid adenylation domain-containing protein | SAMN06297358_3321 | Not Available | Positive | 3867864 - 3871865 | 149964.0 |
| hypothetical protein | SAMN06297358_3322 | Not Available | Negative | 3872077 - 3872991 | 34794.1 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN06297358_3323 | Not Available | Negative | 3873006 - 3874334 | 49441.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_3324 | Not Available | Negative | 3874347 - 3875546 | 45652.7 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN06297358_3325 | Not Available | Negative | 3875651 - 3876850 | 45489.0 |
| o-antigen ligase | SAMN06297358_3326 | Not Available | Negative | 3876834 - 3878291 | 53186.5 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN06297358_3327 | Not Available | Negative | 3878300 - 3880456 | 81339.9 |
| outer membrane efflux protein | SAMN06297358_3328 | Not Available | Negative | 3880464 - 3881144 | 25762.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

