Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3309 | Not Available | Negative | 3852098 - 3852496 | 15522.5 |
| tonb family c-terminal domain-containing protein | SAMN06297358_3310 | Not Available | Negative | 3852499 - 3853155 | 24433.8 |
| hemolysin iii | SAMN06297358_3311 | Not Available | Negative | 3853478 - 3854113 | 24050.1 |
| ribosome-binding factor a | SAMN06297358_3312 | Not Available | Negative | 3854106 - 3854486 | 14348.0 |
| gtp-binding protein hflx | SAMN06297358_3313 | Not Available | Negative | 3854587 - 3855786 | 45886.4 |
| hypothetical protein | SAMN06297358_3314 | Not Available | Negative | 3855966 - 3856388 | 15085.8 |
| uncharacterized protein | SAMN06297358_3315 | Not Available | Positive | 3856546 - 3858834 | 84718.6 |
| capsular polysaccharide synthesis protein | SAMN06297358_3316 | Not Available | Negative | 3859032 - 3859766 | 28606.3 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN06297358_3317 | Not Available | Negative | 3859799 - 3860530 | 28540.2 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN06297358_3318 | Not Available | Negative | 3860527 - 3862083 | 58676.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

