Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3299 | Not Available | Positive | 3841814 - 3843043 | 46310.4 |
| protein of unknown function | SAMN06297358_3300 | Not Available | Positive | 3843159 - 3843875 | 25617.4 |
| peptidase family m28 | SAMN06297358_3301 | Not Available | Positive | 3844025 - 3844939 | 34565.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN06297358_3302 | Not Available | Positive | 3844941 - 3845522 | 21906.8 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN06297358_3303 | Not Available | Negative | 3845580 - 3846215 | 23885.7 |
| hypothetical protein | SAMN06297358_3304 | Not Available | Negative | 3846256 - 3846606 | 13386.3 |
| heat shock protein hslj | SAMN06297358_3305 | Not Available | Negative | 3846694 - 3847092 | 14716.9 |
| uncharacterized conserved protein | SAMN06297358_3306 | Not Available | Negative | 3847097 - 3848074 | 37792.3 |
| lipid kinase, yegs/rv2252/bmru family | SAMN06297358_3307 | Not Available | Positive | 3848127 - 3849005 | 32510.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_3308 | Not Available | Positive | 3849272 - 3852082 | 105748.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

