Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN06297358_3289 | Not Available | Negative | 3831265 - 3832602 | 49292.9 |
| abc-2 type transport system atp-binding protein | SAMN06297358_3290 | Not Available | Negative | 3832595 - 3833503 | 34515.4 |
| predicted purr-regulated permease perm | SAMN06297358_3291 | Not Available | Negative | 3833998 - 3835080 | 40121.5 |
| dna-binding transcriptional regulator, lrp family | SAMN06297358_3292 | Not Available | Negative | 3835131 - 3835619 | 18340.3 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN06297358_3293 | Not Available | Positive | 3835718 - 3836701 | 35690.4 |
| uncharacterized conserved protein yece, duf72 family | SAMN06297358_3294 | Not Available | Negative | 3836698 - 3837417 | 28138.4 |
| hypothetical protein | SAMN06297358_3295 | Not Available | Positive | 3837540 - 3838040 | 18642.5 |
| hypothetical protein | SAMN06297358_3296 | Not Available | Negative | 3838165 - 3838290 | 4308.21 |
| hypothetical protein | SAMN06297358_3297 | Not Available | Negative | 3839013 - 3839531 | 20084.7 |
| molecular chaperone htpg | SAMN06297358_3298 | Not Available | Positive | 3839656 - 3841539 | 70301.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

